IL_7AZO_262
3D structure
- PDB id
- 7AZO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S thermus thermophilus ribosome with bound antibiotic lead SEQ-977
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.3 Å
Loop
- Sequence
- CUAAGUG*CUUAAG
- Length
- 13 nucleotides
- Bulged bases
- 7AZO|1|23SB|U|1190, 7AZO|1|23SB|A|1192
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7AZO_262 not in the Motif Atlas
- Geometric match to IL_4WF9_039
- Geometric discrepancy: 0.1245
- The information below is about IL_4WF9_039
- Detailed Annotation
- Kink-turn related
- Broad Annotation
- No text annotation
- Motif group
- IL_57188.5
- Basepair signature
- cWW-tWW-L-tWW-cWW-cSH
- Number of instances in this motif group
- 5
Unit IDs
7AZO|1|23SB|C|1066
7AZO|1|23SB|U|1067
7AZO|1|23SB|A|1068
7AZO|1|23SB|A|1069
7AZO|1|23SB|G|1070
7AZO|1|23SB|U|1071
7AZO|1|23SB|G|1072
*
7AZO|1|23SB|C|1188
7AZO|1|23SB|U|1189
7AZO|1|23SB|U|1190
7AZO|1|23SB|A|1191
7AZO|1|23SB|A|1192
7AZO|1|23SB|G|1193
Current chains
- Chain 23SB
- 23S rRNA
Nearby chains
- Chain L13B
- 50S ribosomal protein L13
- Chain L6B
- 50S ribosomal protein L6
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