3D structure

PDB id
7AZO (explore in PDB, NAKB, or RNA 3D Hub)
Description
70S thermus thermophilus ribosome with bound antibiotic lead SEQ-977
Experimental method
X-RAY DIFFRACTION
Resolution
3.3 Å

Loop

Sequence
CAGGAUGUUGAUCAUUUAAAGAGUG*CUCACUG
Length
32 nucleotides
Bulged bases
None detected
QA status
Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7AZO|1|23SB|C|1101
7AZO|1|23SB|A|1102
7AZO|1|23SB|G|1103
7AZO|1|23SB|G|1104
7AZO|1|23SB|A|1105
7AZO|1|23SB|U|1106
7AZO|1|23SB|G|1107
7AZO|1|23SB|U|1108
7AZO|1|23SB|U|1109
7AZO|1|23SB|G|1110
7AZO|1|23SB|A|1125
7AZO|1|23SB|U|1126
7AZO|1|23SB|C|1127
7AZO|1|23SB|A|1128
7AZO|1|23SB|U|1129
7AZO|1|23SB|U|1130
7AZO|1|23SB|U|1131
7AZO|1|23SB|A|1132
7AZO|1|23SB|A|1133
7AZO|1|23SB|A|1134
7AZO|1|23SB|G|1135
7AZO|1|23SB|A|1136
7AZO|1|23SB|G|1137
7AZO|1|23SB|U|1138
7AZO|1|23SB|G|1139
*
7AZO|1|23SB|C|1148
7AZO|1|23SB|U|1149
7AZO|1|23SB|C|1150
7AZO|1|23SB|A|1151
7AZO|1|23SB|C|1152
7AZO|1|23SB|U|1153
7AZO|1|23SB|G|1154

Current chains

Chain 23SB
23S rRNA

Nearby chains

Chain L6B
50S ribosomal protein L6

Coloring options:

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