IL_7AZO_271
3D structure
- PDB id
- 7AZO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S thermus thermophilus ribosome with bound antibiotic lead SEQ-977
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.3 Å
Loop
- Sequence
- AUGAGUAA*UGAAAUU
- Length
- 15 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7AZO_271 not in the Motif Atlas
- Geometric match to IL_7RQB_049
- Geometric discrepancy: 0.0522
- The information below is about IL_7RQB_049
- Detailed Annotation
- 8x7 Sarcin-Ricin; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_04346.7
- Basepair signature
- cWW-cWW-tSH-tHH-cSH-tWH-tHS-cWW
- Number of instances in this motif group
- 15
Unit IDs
7AZO|1|23SB|A|1311
7AZO|1|23SB|U|1312
7AZO|1|23SB|G|1313
7AZO|1|23SB|A|1314
7AZO|1|23SB|G|1315
7AZO|1|23SB|U|1316
7AZO|1|23SB|A|1317
7AZO|1|23SB|A|1318
*
7AZO|1|23SB|U|2036
7AZO|1|23SB|G|2037
7AZO|1|23SB|A|2038
7AZO|1|23SB|A|2039
7AZO|1|23SB|A|2040
7AZO|1|23SB|U|2041
7AZO|1|23SB|U|2042
Current chains
- Chain 23SB
- 23S rRNA
Nearby chains
- Chain L17B
- 50S ribosomal protein L17
- Chain L22B
- 50S ribosomal protein L22
- Chain L32B
- 50S ribosomal protein L32
- Chain L4B
- 50S ribosomal protein L4
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