IL_7AZO_310
3D structure
- PDB id
- 7AZO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S thermus thermophilus ribosome with bound antibiotic lead SEQ-977
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.3 Å
Loop
- Sequence
- CAG*CGGAG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7AZO_310 not in the Motif Atlas
- Geometric match to IL_4WF9_086
- Geometric discrepancy: 0.3371
- The information below is about IL_4WF9_086
- Detailed Annotation
- Isolated tHS basepair with bulges
- Broad Annotation
- No text annotation
- Motif group
- IL_14250.1
- Basepair signature
- cWW-tSH-L-cWW-L
- Number of instances in this motif group
- 10
Unit IDs
7AZO|1|23SB|C|2312
7AZO|1|23SB|A|2313
7AZO|1|23SB|G|2314
*
7AZO|1|23SB|C|2332
7AZO|1|23SB|G|2333
7AZO|1|23SB|G|2334
7AZO|1|23SB|A|2335
7AZO|1|23SB|G|2336
Current chains
- Chain 23SB
- 23S rRNA
Nearby chains
- Chain 5SB
- 5S ribosomal RNA; 5S rRNA
- Chain L18B
- 50S ribosomal protein L18
- Chain L27B
- 50S ribosomal protein L27
- Chain L5B
- 50S ribosomal protein L5
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