IL_7AZO_328

3D structure

PDB id

7AZO (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S thermus thermophilus ribosome with bound antibiotic lead SEQ-977

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

CU*AUAAG

Length

7 nucleotides

Bulged bases

7AZO|1|23SB|A|2729

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7AZO_328 not in the Motif Atlas

Geometric match to IL_7RQB_106

Geometric discrepancy: 0.0594

The information below is about IL_7RQB_106

Detailed Annotation

Multiple bulged bases

Broad Annotation

No text annotation

Motif group

IL_71530.2

Basepair signature

cWW-cWW

Number of instances in this motif group

16

Unit IDs

7AZO|1|23SB|C|2710
7AZO|1|23SB|U|2711
*
7AZO|1|23SB|A|2726
7AZO|1|23SB|U|2727
7AZO|1|23SB|A|2728
7AZO|1|23SB|A|2729
7AZO|1|23SB|G|2730

Current chains

Chain 23SB

23S rRNA

Nearby chains

Chain L17B

50S ribosomal protein L17

Chain L19B

50S ribosomal protein L19