IL_7AZO_338
3D structure
- PDB id
- 7AZO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S thermus thermophilus ribosome with bound antibiotic lead SEQ-977
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.3 Å
Loop
- Sequence
- CGG*CCAG
- Length
- 7 nucleotides
- Bulged bases
- 7AZO|1|5SB|A|68
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7AZO_338 not in the Motif Atlas
- Geometric match to IL_5ML7_010
- Geometric discrepancy: 0.273
- The information below is about IL_5ML7_010
- Detailed Annotation
- Isolated non-canonical cWW with bulges
- Broad Annotation
- Isolated non-canonical cWW with bulges
- Motif group
- IL_07785.1
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 33
Unit IDs
7AZO|1|5SB|C|19
7AZO|1|5SB|G|20
7AZO|1|5SB|G|21
*
7AZO|1|5SB|C|66
7AZO|1|5SB|C|67
7AZO|1|5SB|A|68
7AZO|1|5SB|G|69
Current chains
- Chain 5SB
- 5S rRNA
Nearby chains
- Chain 23SB
- Large subunit ribosomal RNA; LSU rRNA
- Chain L18B
- 50S ribosomal protein L18
- Chain L25B
- 50S ribosomal protein L25
- Chain L5B
- 50S ribosomal protein L5
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