IL_7AZO_352

3D structure

PDB id

7AZO (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S thermus thermophilus ribosome with bound antibiotic lead SEQ-977

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

UGG*CUGA

Length

7 nucleotides

Bulged bases

7AZO|1|16SB|G|1029

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7AZO_352 not in the Motif Atlas

Homologous match to IL_6CZR_128

Geometric discrepancy: 0.1611

The information below is about IL_6CZR_128

Detailed Annotation

Single bulged G, near cWW

Broad Annotation

Single bulged G, near cWW

Motif group

IL_52767.5

Basepair signature

cWW-L-R-cWW

Number of instances in this motif group

28

Unit IDs

7AZO|1|16SB|U|1016
7AZO|1|16SB|G|1017
7AZO|1|16SB|G|1018
*
7AZO|1|16SB|C|1027
7AZO|1|16SB|U|1028
7AZO|1|16SB|G|1029
7AZO|1|16SB|A|1030

Current chains

Chain 16SB

16S rRNA

Nearby chains

Chain S16B

30S ribosomal protein S16