IL_7AZO_361

3D structure

PDB id

7AZO (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S thermus thermophilus ribosome with bound antibiotic lead SEQ-977

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

GGAGCCUGUGAACCCC*GGGGGGAGGCGCCGGUGAAAUAC

Length

39 nucleotides

Bulged bases

7AZO|1|23SA|A|2151, 7AZO|1|23SA|U|2157, 7AZO|1|23SA|G|2190, 7AZO|1|23SA|G|2191, 7AZO|1|23SA|U|2192

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7AZO|1|23SA|G|2149
7AZO|1|23SA|G|2150
7AZO|1|23SA|A|2151
7AZO|1|23SA|G|2152
7AZO|1|23SA|C|2153
7AZO|1|23SA|C|2154
7AZO|1|23SA|U|2155
7AZO|1|23SA|G|2156
7AZO|1|23SA|U|2157
7AZO|1|23SA|G|2158
7AZO|1|23SA|A|2159
7AZO|1|23SA|A|2160
7AZO|1|23SA|C|2161
7AZO|1|23SA|C|2162
7AZO|1|23SA|C|2163
7AZO|1|23SA|C|2164
*
7AZO|1|23SA|G|2177
7AZO|1|23SA|G|2178
7AZO|1|23SA|G|2179
7AZO|1|23SA|G|2180
7AZO|1|23SA|G|2181
7AZO|1|23SA|G|2182
7AZO|1|23SA|A|2183
7AZO|1|23SA|G|2184
7AZO|1|23SA|G|2185
7AZO|1|23SA|C|2186
7AZO|1|23SA|G|2187
7AZO|1|23SA|C|2188
7AZO|1|23SA|C|2189
7AZO|1|23SA|G|2190
7AZO|1|23SA|G|2191
7AZO|1|23SA|U|2192
7AZO|1|23SA|G|2193
7AZO|1|23SA|A|2194
7AZO|1|23SA|A|2195
7AZO|1|23SA|A|2196
7AZO|1|23SA|U|2197
7AZO|1|23SA|A|2198
7AZO|1|23SA|C|2199

Current chains

Chain 23SA

23S rRNA

Nearby chains

Chain ESIA

Transfer RNA; tRNA