IL_7AZS_037
3D structure
- PDB id
- 7AZS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S thermus thermophilus ribosome with bound antibiotic lead SEQ-569
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- GCA*UUCCC
- Length
- 8 nucleotides
- Bulged bases
- 7AZS|1|16SA|C|1557
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7AZS_037 not in the Motif Atlas
- Homologous match to IL_4LFB_037
- Geometric discrepancy: 0.1118
- The information below is about IL_4LFB_037
- Detailed Annotation
- Minor groove platform
- Broad Annotation
- No text annotation
- Motif group
- IL_61370.1
- Basepair signature
- cWW-cWS-L-cWW-L
- Number of instances in this motif group
- 4
Unit IDs
7AZS|1|16SA|G|1556
7AZS|1|16SA|C|1557
7AZS|1|16SA|A|1558
*
7AZS|1|16SA|U|2008
7AZS|1|16SA|U|2009
7AZS|1|16SA|C|2010
7AZS|1|16SA|C|2011
7AZS|1|16SA|C|2012
Current chains
- Chain 16SA
- 16S rRNA
Nearby chains
- Chain ESIA
- Transfer RNA; tRNA
- Chain MRNA
- mRNA
- Chain PSIA
- Transfer RNA; tRNA
- Chain S7A
- 30S ribosomal protein S7
- Chain S9A
- 30S ribosomal protein S9
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