IL_7AZS_081
3D structure
- PDB id
- 7AZS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S thermus thermophilus ribosome with bound antibiotic lead SEQ-569
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- G(PSU)GCCAG*CGGUAAUAC
- Length
- 16 nucleotides
- Bulged bases
- 7AZS|1|16SB|A|1161, 7AZS|1|16SB|U|1163
- QA status
- Modified nucleotides: PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7AZS_081 not in the Motif Atlas
- Homologous match to IL_4LFB_021
- Geometric discrepancy: 0.1259
- The information below is about IL_4LFB_021
- Detailed Annotation
- Kink-turn related
- Broad Annotation
- No text annotation
- Motif group
- IL_52042.1
- Basepair signature
- cWW-cSW-tWH-L-R-L-R-tHS-cWW
- Number of instances in this motif group
- 5
Unit IDs
7AZS|1|16SB|G|1144
7AZS|1|16SB|PSU|1145
7AZS|1|16SB|G|1146
7AZS|1|16SB|C|1147
7AZS|1|16SB|C|1148
7AZS|1|16SB|A|1149
7AZS|1|16SB|G|1150
*
7AZS|1|16SB|C|1157
7AZS|1|16SB|G|1158
7AZS|1|16SB|G|1159
7AZS|1|16SB|U|1160
7AZS|1|16SB|A|1161
7AZS|1|16SB|A|1162
7AZS|1|16SB|U|1163
7AZS|1|16SB|A|1164
7AZS|1|16SB|C|1165
Current chains
- Chain 16SB
- 16S rRNA
Nearby chains
- Chain ASIB
- Transfer RNA; tRNA
- Chain MRNB
- mRNA
- Chain S12B
- 30S ribosomal protein S12
- Chain S3B
- 30S ribosomal protein S3
- Chain S4B
- 30S ribosomal protein S4
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