IL_7AZS_083
3D structure
- PDB id
- 7AZS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S thermus thermophilus ribosome with bound antibiotic lead SEQ-569
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- UGUAG*UGAGG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7AZS_083 not in the Motif Atlas
- Homologous match to IL_4LFB_023
- Geometric discrepancy: 0.0958
- The information below is about IL_4LFB_023
- Detailed Annotation
- tSH-tHW-tHS
- Broad Annotation
- No text annotation
- Motif group
- IL_05821.1
- Basepair signature
- cWW-tSH-tHW-tHS-cWW
- Number of instances in this motif group
- 17
Unit IDs
7AZS|1|16SB|U|1209
7AZS|1|16SB|G|1210
7AZS|1|16SB|U|1211
7AZS|1|16SB|A|1212
7AZS|1|16SB|G|1213
*
7AZS|1|16SB|U|1386
7AZS|1|16SB|G|1387
7AZS|1|16SB|A|1388
7AZS|1|16SB|G|1389
7AZS|1|16SB|G|1390
Current chains
- Chain 16SB
- 16S rRNA
Nearby chains
- Chain 23SB
- Large subunit ribosomal RNA; LSU rRNA
- Chain S12B
- 30S ribosomal protein S12
- Chain S15B
- 30S ribosomal protein S15
- Chain S17B
- 30S ribosomal protein S17
- Chain S8B
- 30S ribosomal protein S8
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