IL_7AZS_091
3D structure
- PDB id
- 7AZS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S thermus thermophilus ribosome with bound antibiotic lead SEQ-569
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- GAGUAG*CGCAGAUAC
- Length
- 15 nucleotides
- Bulged bases
- 7AZS|1|16SB|A|1331
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7AZS_091 not in the Motif Atlas
- Homologous match to IL_4LFB_031
- Geometric discrepancy: 0.0969
- The information below is about IL_4LFB_031
- Detailed Annotation
- Kink-turn
- Broad Annotation
- No text annotation
- Motif group
- IL_95727.1
- Basepair signature
- cWW-L-tSH-L-tHW-tHS-R-cWW-L
- Number of instances in this motif group
- 1
Unit IDs
7AZS|1|16SB|G|1312
7AZS|1|16SB|A|1313
7AZS|1|16SB|G|1314
7AZS|1|16SB|U|1315
7AZS|1|16SB|A|1316
7AZS|1|16SB|G|1317
*
7AZS|1|16SB|C|1328
7AZS|1|16SB|G|1329
7AZS|1|16SB|C|1330
7AZS|1|16SB|A|1331
7AZS|1|16SB|G|1332
7AZS|1|16SB|A|1333
7AZS|1|16SB|U|1334
7AZS|1|16SB|A|1335
7AZS|1|16SB|C|1336
Current chains
- Chain 16SB
- 16S rRNA
Nearby chains
- Chain 23SB
- Large subunit ribosomal RNA; LSU rRNA
- Chain S11B
- 30S ribosomal protein S11
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