IL_7AZS_100

3D structure

PDB id

7AZS (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S thermus thermophilus ribosome with bound antibiotic lead SEQ-569

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

GG*CCC

Length

5 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7AZS_100 not in the Motif Atlas

Geometric match to IL_7Q82_001

Geometric discrepancy: 0.251

The information below is about IL_7Q82_001

Detailed Annotation

Multiple bulged bases

Broad Annotation

No text annotation

Motif group

IL_82107.1

Basepair signature

cWW-cWW

Number of instances in this motif group

34

Unit IDs

7AZS|1|16SB|G|1625
7AZS|1|16SB|G|1626
*
7AZS|1|16SB|C|1665
7AZS|1|16SB|C|1666
7AZS|1|16SB|C|1667

Current chains

Chain 16SB

16S rRNA

Nearby chains

Chain S3B

30S ribosomal protein S3