IL_7AZS_104
3D structure
- PDB id
- 7AZS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S thermus thermophilus ribosome with bound antibiotic lead SEQ-569
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- GG*UCAGC
- Length
- 7 nucleotides
- Bulged bases
- 7AZS|1|16SB|C|1827, 7AZS|1|16SB|A|1828
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7AZS_104 not in the Motif Atlas
- Geometric match to IL_4LFB_045
- Geometric discrepancy: 0.0979
- The information below is about IL_4LFB_045
- Detailed Annotation
- Minor groove platform
- Broad Annotation
- No text annotation
- Motif group
- IL_24264.1
- Basepair signature
- cWW-L-R-L-R-L-R-cWW
- Number of instances in this motif group
- 6
Unit IDs
7AZS|1|16SB|G|1685
7AZS|1|16SB|G|1686
*
7AZS|1|16SB|U|1826
7AZS|1|16SB|C|1827
7AZS|1|16SB|A|1828
7AZS|1|16SB|G|1829
7AZS|1|16SB|C|1830
Current chains
- Chain 16SB
- 16S rRNA
Nearby chains
- Chain ASIB
- Transfer RNA; tRNA
- Chain S10B
- 30S ribosomal protein S10
- Chain S14B
- 30S ribosomal protein S14 type Z
- Chain S3B
- 30S ribosomal protein S3
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