IL_7AZS_130

3D structure

PDB id

7AZS (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S thermus thermophilus ribosome with bound antibiotic lead SEQ-569

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

CGGAC*GUG

Length

8 nucleotides

Bulged bases

None detected

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7AZS_130 not in the Motif Atlas

Homologous match to IL_8VTW_009

Geometric discrepancy: 0.4639

The information below is about IL_8VTW_009

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_45612.4

Basepair signature

cWW-L-R-L-cWW

Number of instances in this motif group

14

Unit IDs

7AZS|1|23SA|C|298
7AZS|1|23SA|G|299
7AZS|1|23SA|G|300
7AZS|1|23SA|A|303
7AZS|1|23SA|C|304
*
7AZS|1|23SA|G|386
7AZS|1|23SA|U|387
7AZS|1|23SA|G|388

Current chains

Chain 23SA

23S rRNA

Nearby chains