IL_7AZS_173

3D structure

PDB id

7AZS (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S thermus thermophilus ribosome with bound antibiotic lead SEQ-569

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

UAG*CAGG

Length

7 nucleotides

Bulged bases

7AZS|1|23SA|G|1609

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7AZS_173 not in the Motif Atlas

Geometric match to IL_7A0S_052

Geometric discrepancy: 0.2422

The information below is about IL_7A0S_052

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_38565.2

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

12

Unit IDs

7AZS|1|23SA|U|1482
7AZS|1|23SA|A|1483
7AZS|1|23SA|G|1484
*
7AZS|1|23SA|C|1607
7AZS|1|23SA|A|1608
7AZS|1|23SA|G|1609
7AZS|1|23SA|G|1610

Current chains

Chain 23SA

23S rRNA

Nearby chains

Chain L2A

50S ribosomal protein L2