IL_7AZS_260
3D structure
- PDB id
- 7AZS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S thermus thermophilus ribosome with bound antibiotic lead SEQ-569
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- CUAAG*CGAAG
- Length
- 10 nucleotides
- Bulged bases
- 7AZS|1|23SB|A|1205
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7AZS_260 not in the Motif Atlas
- Geometric match to IL_4WF9_036
- Geometric discrepancy: 0.0639
- The information below is about IL_4WF9_036
- Detailed Annotation
- UAA/GAN
- Broad Annotation
- No text annotation
- Motif group
- IL_08938.1
- Basepair signature
- cWW-tWH-L-tHS-cWW
- Number of instances in this motif group
- 22
Unit IDs
7AZS|1|23SB|C|1046
7AZS|1|23SB|U|1047
7AZS|1|23SB|A|1048
7AZS|1|23SB|A|1049
7AZS|1|23SB|G|1050
*
7AZS|1|23SB|C|1202
7AZS|1|23SB|G|1203
7AZS|1|23SB|A|1204
7AZS|1|23SB|A|1205
7AZS|1|23SB|G|1206
Current chains
- Chain 23SB
- 23S rRNA
Nearby chains
- Chain 5SB
- 5S ribosomal RNA; 5S rRNA
- Chain L20B
- 50S ribosomal protein L20
- Chain L21B
- 50S ribosomal protein L21
- Chain L30B
- 50S ribosomal protein L30
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