IL_7AZS_274

3D structure

PDB id

7AZS (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S thermus thermophilus ribosome with bound antibiotic lead SEQ-569

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

CUAAG*CGAAG

Length

10 nucleotides

Bulged bases

7AZS|1|23SB|A|1428

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7AZS_274 not in the Motif Atlas

Geometric match to IL_7RQB_052

Geometric discrepancy: 0.0618

The information below is about IL_7RQB_052

Detailed Annotation

UAA/GAN

Broad Annotation

No text annotation

Motif group

IL_89002.2

Basepair signature

cWW-tWH-L-tHS-cWW

Number of instances in this motif group

20

Unit IDs

7AZS|1|23SB|C|1400
7AZS|1|23SB|U|1401
7AZS|1|23SB|A|1402
7AZS|1|23SB|A|1403
7AZS|1|23SB|G|1404
*
7AZS|1|23SB|C|1425
7AZS|1|23SB|G|1426
7AZS|1|23SB|A|1427
7AZS|1|23SB|A|1428
7AZS|1|23SB|G|1429

Current chains

Chain 23SB

23S rRNA

Nearby chains

Chain L2B

50S ribosomal protein L2

Chain L34B

50S ribosomal protein L34