IL_7AZS_355
3D structure
- PDB id
- 7AZS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S thermus thermophilus ribosome with bound antibiotic lead SEQ-569
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- GGAAU*GGAAC
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7AZS_355 not in the Motif Atlas
- Homologous match to IL_4LFB_065
- Geometric discrepancy: 0.0894
- The information below is about IL_4LFB_065
- Detailed Annotation
- Triple non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_71154.2
- Basepair signature
- cWW-cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 15
Unit IDs
7AZS|1|16SB|G|1302
7AZS|1|16SB|G|1303
7AZS|1|16SB|A|1304
7AZS|1|16SB|A|1305
7AZS|1|16SB|U|1306
*
7AZS|1|16SB|G|1342
7AZS|1|16SB|G|1343
7AZS|1|16SB|A|1344
7AZS|1|16SB|A|1345
7AZS|1|16SB|C|1346
Current chains
- Chain 16SB
- 16S rRNA
Nearby chains
- Chain L2B
- 50S ribosomal protein L2
- Chain S11B
- 30S ribosomal protein S11
- Chain S18B
- 30S ribosomal protein S18
- Chain S6B
- 30S ribosomal protein S6
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