IL_7AZS_382

3D structure

PDB id

7AZS (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S thermus thermophilus ribosome with bound antibiotic lead SEQ-569

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

GUC*GC

Length

5 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7AZS_382 not in the Motif Atlas

Geometric match to IL_5J7L_032

Geometric discrepancy: 0.3214

The information below is about IL_5J7L_032

Detailed Annotation

Single stack bend

Broad Annotation

No text annotation

Motif group

IL_26793.1

Basepair signature

cWW-L-cWW

Number of instances in this motif group

16

Unit IDs

7AZS|1|23SA|G|2415
7AZS|1|23SA|U|2416
7AZS|1|23SA|C|2417
*
7AZS|1|23SA|G|2430
7AZS|1|23SA|C|2431

Current chains

Chain 23SA

23S rRNA

Nearby chains

Chain L15A

50S ribosomal protein L15

Chain L28A

50S ribosomal protein L28

Chain L33A

50S ribosomal protein L33

Chain L35A

50S ribosomal protein L35