3D structure

PDB id
7AZY (explore in PDB, NAKB, or RNA 3D Hub)
Description
Context-specific inhibition of eukaryotic translation by macrolide antibiotics
Experimental method
ELECTRON MICROSCOPY
Resolution
2.877 Å

Loop

Sequence
CC*GCG
Length
5 nucleotides
Bulged bases
7AZY|1|G|C|151
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7AZY_001 not in the Motif Atlas
Homologous match to IL_8C3A_002
Geometric discrepancy: 0.1291
The information below is about IL_8C3A_002
Detailed Annotation
Single bulged C
Broad Annotation
No text annotation
Motif group
IL_61258.13
Basepair signature
cWW-L-cWW
Number of instances in this motif group
40

Unit IDs

7AZY|1|E|C|7
7AZY|1|E|C|8
*
7AZY|1|G|G|150
7AZY|1|G|C|151
7AZY|1|G|G|152

Current chains

Chain E
25S ribosomal RNA
Chain G
5.8S ribosomal RNA

Nearby chains

Chain I
60S ribosomal protein L25
Chain R
60S ribosomal protein L15-A
Chain b
60S ribosomal protein L8-A

Coloring options:


Copyright 2025 BGSU RNA group. Page generated in 0.1306 s