IL_7AZY_029

3D structure

PDB id

7AZY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Context-specific inhibition of eukaryotic translation by macrolide antibiotics

Experimental method

ELECTRON MICROSCOPY

Resolution

2.877 Å

Loop

Sequence

UGAAG*UGGAG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7AZY_029 not in the Motif Atlas

Geometric match to IL_5J7L_263

Geometric discrepancy: 0.098

The information below is about IL_5J7L_263

Detailed Annotation

Triple sheared

Broad Annotation

No text annotation

Motif group

IL_50730.2

Basepair signature

cWW-tSH-tHS-tHS-cWW

Number of instances in this motif group

19

Unit IDs

7AZY|1|E|U|834
7AZY|1|E|G|835
7AZY|1|E|A|836
7AZY|1|E|A|837
7AZY|1|E|G|838
*
7AZY|1|E|U|855
7AZY|1|E|G|856
7AZY|1|E|G|857
7AZY|1|E|A|858
7AZY|1|E|G|859

Current chains

Chain E

25S ribosomal RNA

Nearby chains

Chain H

60S ribosomal protein L19-A

Chain U

60S ribosomal protein L43-A

Chain x

60S ribosomal protein L2-A