IL_7AZY_072

3D structure

PDB id

7AZY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Context-specific inhibition of eukaryotic translation by macrolide antibiotics

Experimental method

ELECTRON MICROSCOPY

Resolution

2.877 Å

Loop

Sequence

UUAUCA*UCUUAUG

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7AZY_072 not in the Motif Atlas

Homologous match to IL_5TBW_072

Geometric discrepancy: 0.1322

The information below is about IL_5TBW_072

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_39753.2

Basepair signature

cWW-L-R-tWH-L-R-L-R-L-cWW

Number of instances in this motif group

2

Unit IDs

7AZY|1|E|U|1702
7AZY|1|E|U|1703
7AZY|1|E|A|1704
7AZY|1|E|U|1705
7AZY|1|E|C|1706
7AZY|1|E|A|1707
*
7AZY|1|E|U|1737
7AZY|1|E|C|1738
7AZY|1|E|U|1739
7AZY|1|E|U|1740
7AZY|1|E|A|1741
7AZY|1|E|U|1742
7AZY|1|E|G|1743

Current chains

Chain E

25S ribosomal RNA

Nearby chains

Chain B

60S ribosomal protein L34-A