IL_7AZY_132

3D structure

PDB id

7AZY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Context-specific inhibition of eukaryotic translation by macrolide antibiotics

Experimental method

ELECTRON MICROSCOPY

Resolution

2.877 Å

Loop

Sequence

UGUAAG*CUGAG

Length

11 nucleotides

Bulged bases

7AZY|1|E|G|3369

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7AZY_132 not in the Motif Atlas

Homologous match to IL_5TBW_133

Geometric discrepancy: 0.0913

The information below is about IL_5TBW_133

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_83162.8

Basepair signature

cWW-cWW-tSH-cWW-tHH-L

Number of instances in this motif group

4

Unit IDs

7AZY|1|E|U|3332
7AZY|1|E|G|3333
7AZY|1|E|U|3334
7AZY|1|E|A|3335
7AZY|1|E|A|3336
7AZY|1|E|G|3337
*
7AZY|1|E|C|3367
7AZY|1|E|U|3368
7AZY|1|E|G|3369
7AZY|1|E|A|3370
7AZY|1|E|G|3371

Current chains

Chain E

25S ribosomal RNA

Nearby chains

Chain f

60S ribosomal protein L24-A

Chain l

60S ribosomal protein L3

Chain n

60S ribosomal protein L31-A