IL_7AZY_147

3D structure

PDB id

7AZY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Context-specific inhibition of eukaryotic translation by macrolide antibiotics

Experimental method

ELECTRON MICROSCOPY

Resolution

2.877 Å

Loop

Sequence

UG*CAG

Length

5 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7AZY_147 not in the Motif Atlas

Geometric match to IL_1U6B_007

Geometric discrepancy: 0.2263

The information below is about IL_1U6B_007

Detailed Annotation

Minor groove platform

Broad Annotation

No text annotation

Motif group

IL_51454.3

Basepair signature

cWW-cSH-cWW

Number of instances in this motif group

45

Unit IDs

7AZY|1|E|U|1564
7AZY|1|E|G|1565
*
7AZY|1|E|C|1574
7AZY|1|E|A|1575
7AZY|1|E|G|1576

Current chains

Chain E

25S ribosomal RNA

Nearby chains

Chain G

5.8S ribosomal RNA; 5.8S rRNA

Chain I

60S ribosomal protein L25