3D structure

PDB id
7B5K (explore in PDB, NAKB, or RNA 3D Hub)
Description
E. coli 70S containing suppressor tRNA in the A-site stabilized by a Negamycin analogue and P-site tRNA-nascent chain.
Experimental method
ELECTRON MICROSCOPY
Resolution
2.9 Å

Loop

Sequence
UAG*CAAAA
Length
8 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7B5K_010 not in the Motif Atlas
Homologous match to IL_5J7L_254
Geometric discrepancy: 0.1003
The information below is about IL_5J7L_254
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_69440.3
Basepair signature
cWW-L-R-cSH-cWW
Number of instances in this motif group
3

Unit IDs

7B5K|1|A|U|293
7B5K|1|A|A|294
7B5K|1|A|G|295
*
7B5K|1|A|C|343
7B5K|1|A|A|344
7B5K|1|A|A|345
7B5K|1|A|A|346
7B5K|1|A|A|347

Current chains

Chain A
23S rRNA

Nearby chains

Chain U
50S ribosomal protein L24

Coloring options:


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