IL_7B5K_079
3D structure
- PDB id
- 7B5K (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S containing suppressor tRNA in the A-site stabilized by a Negamycin analogue and P-site tRNA-nascent chain.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GU(G7M)A*UCC
- Length
- 7 nucleotides
- Bulged bases
- 7B5K|1|A|U|2068
- QA status
- Modified nucleotides: G7M
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7B5K_079 not in the Motif Atlas
- Geometric match to IL_5C5W_002
- Geometric discrepancy: 0.152
- The information below is about IL_5C5W_002
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_87907.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 179
Unit IDs
7B5K|1|A|G|2067
7B5K|1|A|U|2068
7B5K|1|A|G7M|2069
7B5K|1|A|A|2070
*
7B5K|1|A|U|2441
7B5K|1|A|C|2442
7B5K|1|A|C|2443
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain E
- 50S ribosomal protein L4
- Chain L
- 50S ribosomal protein L15
- Chain v
- ermC Nacent chain
Coloring options: