IL_7B5K_160
3D structure
- PDB id
- 7B5K (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S containing suppressor tRNA in the A-site stabilized by a Negamycin analogue and P-site tRNA-nascent chain.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GACAU*AC
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7B5K_160 not in the Motif Atlas
- Homologous match to IL_5J7L_043
- Geometric discrepancy: 0.144
- The information below is about IL_5J7L_043
- Detailed Annotation
- Minor groove platform
- Broad Annotation
- No text annotation
- Motif group
- IL_47078.3
- Basepair signature
- cWW-cWS-L-cWW-L
- Number of instances in this motif group
- 4
Unit IDs
7B5K|1|a|G|993
7B5K|1|a|A|994
7B5K|1|a|C|995
7B5K|1|a|A|996
7B5K|1|a|U|997
*
7B5K|1|a|A|1044
7B5K|1|a|C|1045
Current chains
- Chain a
- 16S rRNA
Nearby chains
- Chain n
- 30S ribosomal protein S14
Coloring options: