IL_7B7D_060
3D structure
- PDB id
- 7B7D (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Yeast 80S ribosome bound to eEF3 and A/A- and P/P-tRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- GUC*GUU
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7B7D_060 not in the Motif Atlas
- Geometric match to IL_3SZX_003
- Geometric discrepancy: 0.1533
- The information below is about IL_3SZX_003
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- Isolated non-canonical cWW pair
- Motif group
- IL_01003.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 213
Unit IDs
7B7D|1|2|G|1213
7B7D|1|2|U|1214
7B7D|1|2|C|1215
*
7B7D|1|2|G|1448
7B7D|1|2|U|1449
7B7D|1|2|U|1450
Current chains
- Chain 2
- 18S rRNA
Nearby chains
- Chain C
- 40S ribosomal protein S10-A
- Chain E
- 40S ribosomal protein S15
- Chain M
- 40S ribosomal protein S29-A
- Chain N
- Ubiquitin-40S ribosomal protein S31
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