IL_7B7D_081
3D structure
- PDB id
- 7B7D (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Yeast 80S ribosome bound to eEF3 and A/A- and P/P-tRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- CGCU*AAAAG
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7B7D_081 not in the Motif Atlas
- Homologous match to IL_8CRE_469
- Geometric discrepancy: 0.3124
- The information below is about IL_8CRE_469
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_73099.1
- Basepair signature
- cWW-cHW-L-R-L-cWW
- Number of instances in this motif group
- 3
Unit IDs
7B7D|1|2|C|1644
7B7D|1|2|G|1645
7B7D|1|2|C|1646
7B7D|1|2|U|1647
*
7B7D|1|2|A|1753
7B7D|1|2|A|1754
7B7D|1|2|A|1755
7B7D|1|2|A|1756
7B7D|1|2|G|1757
Current chains
- Chain 2
- 18S rRNA
Nearby chains
- Chain 1
- mRNA
- Chain LA
- Large subunit ribosomal RNA; LSU rRNA
- Chain Lj
- 60S ribosomal protein L41-B
- Chain Sm
- Transfer RNA; tRNA
- Chain c
- 40S ribosomal protein S23-A
- Chain g
- 40S ribosomal protein S30-A
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