IL_7B7D_083
3D structure
- PDB id
- 7B7D (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Yeast 80S ribosome bound to eEF3 and A/A- and P/P-tRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- CGAU*AGAG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7B7D_083 not in the Motif Atlas
- Homologous match to IL_4V88_468
- Geometric discrepancy: 0.0911
- The information below is about IL_4V88_468
- Detailed Annotation
- Double sheared
- Broad Annotation
- Double sheared
- Motif group
- IL_09705.12
- Basepair signature
- cWW-tSH-tHS-cWW
- Number of instances in this motif group
- 35
Unit IDs
7B7D|1|2|C|1653
7B7D|1|2|G|1654
7B7D|1|2|A|1655
7B7D|1|2|U|1656
*
7B7D|1|2|A|1744
7B7D|1|2|G|1745
7B7D|1|2|A|1746
7B7D|1|2|G|1747
Current chains
- Chain 2
- 18S rRNA
Nearby chains
- Chain LA
- Large subunit ribosomal RNA; LSU rRNA
- Chain Lj
- 60S ribosomal protein L41-B
- Chain Lr
- 60S ribosomal protein L23-A
Coloring options: