IL_7B7D_117
3D structure
- PDB id
- 7B7D (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Yeast 80S ribosome bound to eEF3 and A/A- and P/P-tRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- GAAAG*CUAGUAGC
- Length
- 13 nucleotides
- Bulged bases
- 7B7D|1|LA|A|933, 7B7D|1|LA|G|937
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7B7D_117 not in the Motif Atlas
- Homologous match to IL_8C3A_030
- Geometric discrepancy: 0.0948
- The information below is about IL_8C3A_030
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_17470.7
- Basepair signature
- cWW-tWW-L-R-tWH-L-cWW
- Number of instances in this motif group
- 7
Unit IDs
7B7D|1|LA|G|805
7B7D|1|LA|A|806
7B7D|1|LA|A|807
7B7D|1|LA|A|808
7B7D|1|LA|G|809
*
7B7D|1|LA|C|931
7B7D|1|LA|U|932
7B7D|1|LA|A|933
7B7D|1|LA|G|934
7B7D|1|LA|U|935
7B7D|1|LA|A|936
7B7D|1|LA|G|937
7B7D|1|LA|C|938
Current chains
- Chain LA
- 25S rRNA
Nearby chains
- Chain LF
- 60S ribosomal protein L4-A
- Chain LN
- 60S ribosomal protein L13-A
- Chain LP
- 60S ribosomal protein L15-A
- Chain LW
- 60S ribosomal protein L28
- Chain Lf
- 60S ribosomal protein L37-A
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