IL_7B7D_119
3D structure
- PDB id
- 7B7D (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Yeast 80S ribosome bound to eEF3 and A/A- and P/P-tRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- UGAAG*UGGAG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7B7D_119 not in the Motif Atlas
- Homologous match to IL_8C3A_033
- Geometric discrepancy: 0.0888
- The information below is about IL_8C3A_033
- Detailed Annotation
- Triple sheared
- Broad Annotation
- No text annotation
- Motif group
- IL_95716.2
- Basepair signature
- cWW-cWW-tHS-tHS-tSH-cWW
- Number of instances in this motif group
- 18
Unit IDs
7B7D|1|LA|U|834
7B7D|1|LA|G|835
7B7D|1|LA|A|836
7B7D|1|LA|A|837
7B7D|1|LA|G|838
*
7B7D|1|LA|U|855
7B7D|1|LA|G|856
7B7D|1|LA|G|857
7B7D|1|LA|A|858
7B7D|1|LA|G|859
Current chains
- Chain LA
- 25S rRNA
Nearby chains
- Chain LD
- 60S ribosomal protein L2-A
- Chain Ll
- 60S ribosomal protein L43-A
- Chain Ln
- 60S ribosomal protein L19-A
Coloring options: