IL_7B7D_138
3D structure
- PDB id
- 7B7D (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Yeast 80S ribosome bound to eEF3 and A/A- and P/P-tRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- UGCCGGAA*UA
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7B7D_138 not in the Motif Atlas
- Geometric match to IL_5TBW_049
- Geometric discrepancy: 0.1063
- The information below is about IL_5TBW_049
- Detailed Annotation
- SSU/LSU pseudoknot
- Broad Annotation
- No text annotation
- Motif group
- IL_84902.1
- Basepair signature
- cWW-L-cWW-L-L-R-cHH
- Number of instances in this motif group
- 2
Unit IDs
7B7D|1|LA|U|1173
7B7D|1|LA|G|1174
7B7D|1|LA|C|1175
7B7D|1|LA|C|1176
7B7D|1|LA|G|1177
7B7D|1|LA|G|1178
7B7D|1|LA|A|1179
7B7D|1|LA|A|1180
*
7B7D|1|LA|U|1325
7B7D|1|LA|A|1326
Current chains
- Chain LA
- 25S rRNA
Nearby chains
- Chain LI
- 60S ribosomal protein L7-A
- Chain LQ
- 60S ribosomal protein L16-A
- Chain Lb
- 60S ribosomal protein L33-A
- Chain Lo
- 60S ribosomal protein L20-A
Coloring options: