IL_7B7D_158

3D structure

PDB id

7B7D (explore in PDB, NAKB, or RNA 3D Hub)

Description

Yeast 80S ribosome bound to eEF3 and A/A- and P/P-tRNAs

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

UCUUC*GGAAUA

Length

11 nucleotides

Bulged bases

7B7D|1|LA|U|1629

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7B7D_158 not in the Motif Atlas

Geometric match to IL_5TBW_066

Geometric discrepancy: 0.1513

The information below is about IL_5TBW_066

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_48431.1

Basepair signature

cWW-L-R-L-R-L-cWW

Number of instances in this motif group

2

Unit IDs

7B7D|1|LA|U|1627
7B7D|1|LA|C|1628
7B7D|1|LA|U|1629
7B7D|1|LA|U|1630
7B7D|1|LA|C|1631
*
7B7D|1|LA|G|1811
7B7D|1|LA|G|1812
7B7D|1|LA|A|1813
7B7D|1|LA|A|1814
7B7D|1|LA|U|1815
7B7D|1|LA|A|1816

Current chains

Chain LA

25S rRNA

Nearby chains

Chain LV

60S ribosomal protein L27-A