IL_7B7D_163

3D structure

PDB id

7B7D (explore in PDB, NAKB, or RNA 3D Hub)

Description

Yeast 80S ribosome bound to eEF3 and A/A- and P/P-tRNAs

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

UUAAC*GGAAGA

Length

11 nucleotides

Bulged bases

7B7D|1|LA|G|1751

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7B7D_163 not in the Motif Atlas

Homologous match to IL_8C3A_077

Geometric discrepancy: 0.0856

The information below is about IL_8C3A_077

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_69313.1

Basepair signature

cWW-tWH-tHH-tHS-cWW

Number of instances in this motif group

2

Unit IDs

7B7D|1|LA|U|1694
7B7D|1|LA|U|1695
7B7D|1|LA|A|1696
7B7D|1|LA|A|1697
7B7D|1|LA|C|1698
*
7B7D|1|LA|G|1747
7B7D|1|LA|G|1748
7B7D|1|LA|A|1749
7B7D|1|LA|A|1750
7B7D|1|LA|G|1751
7B7D|1|LA|A|1752

Current chains

Chain LA

25S rRNA

Nearby chains

Chain Lc

60S ribosomal protein L34-A

Chain Lg

60S ribosomal protein L38