IL_7B7D_194
3D structure
- PDB id
- 7B7D (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Yeast 80S ribosome bound to eEF3 and A/A- and P/P-tRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- UUGA*UACA
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7B7D_194 not in the Motif Atlas
- Homologous match to IL_8C3A_109
- Geometric discrepancy: 0.1307
- The information below is about IL_8C3A_109
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_67085.2
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 55
Unit IDs
7B7D|1|LA|U|2718
7B7D|1|LA|U|2719
7B7D|1|LA|G|2720
7B7D|1|LA|A|2721
*
7B7D|1|LA|U|2735
7B7D|1|LA|A|2736
7B7D|1|LA|C|2737
7B7D|1|LA|A|2738
Current chains
- Chain LA
- 25S rRNA
Nearby chains
- Chain LG
- 60S ribosomal protein L5
- Chain LX
- 60S ribosomal protein L29
- Chain Lk
- 60S ribosomal protein L42-A
- Chain Lm
- 60S ribosomal protein L18-A
- Chain Lp
- 60S ribosomal protein L21-A
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