IL_7B7D_239
3D structure
- PDB id
- 7B7D (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Yeast 80S ribosome bound to eEF3 and A/A- and P/P-tRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- UAA*UCGA
- Length
- 7 nucleotides
- Bulged bases
- 7B7D|1|LC|G|95
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7B7D_239 not in the Motif Atlas
- Geometric match to IL_5TBW_145
- Geometric discrepancy: 0.1158
- The information below is about IL_5TBW_145
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- Isolated non-canonical cWW pair
- Motif group
- IL_54650.3
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 16
Unit IDs
7B7D|1|LC|U|64
7B7D|1|LC|A|65
7B7D|1|LC|A|66
*
7B7D|1|LC|U|93
7B7D|1|LC|C|94
7B7D|1|LC|G|95
7B7D|1|LC|A|96
Current chains
- Chain LC
- 5.8S rRNA
Nearby chains
- Chain LA
- Large subunit ribosomal RNA; LSU rRNA
- Chain LU
- 60S ribosomal protein L26-A
- Chain Ld
- 60S ribosomal protein L35-A
- Chain Lf
- 60S ribosomal protein L37-A
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