IL_7B7D_254
3D structure
- PDB id
- 7B7D (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Yeast 80S ribosome bound to eEF3 and A/A- and P/P-tRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- GGCU*GAUUC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7B7D_254 not in the Motif Atlas
- Homologous match to IL_8C3A_111
- Geometric discrepancy: 0.081
- The information below is about IL_8C3A_111
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_50458.1
- Basepair signature
- cWW-cWW-L-R-L-cWW
- Number of instances in this motif group
- 5
Unit IDs
7B7D|1|LA|G|2823
7B7D|1|LA|G|2824
7B7D|1|LA|C|2825
7B7D|1|LA|U|2826
*
7B7D|1|LA|G|2863
7B7D|1|LA|A|2864
7B7D|1|LA|U|2865
7B7D|1|LA|U|2866
7B7D|1|LA|C|2867
Current chains
- Chain LA
- 25S rRNA
Nearby chains
- Chain LE
- 60S ribosomal protein L3
- Chain LL
- 60S ribosomal protein L10
- Chain LX
- 60S ribosomal protein L29
- Chain Sm
- Transfer RNA; tRNA
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