IL_7BGE_020

3D structure

PDB id

7BGE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 30S ribosomal subunit in presence of spermidine (head only)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CCGCAC*GUUCCCGGG

Length

15 nucleotides

Bulged bases

7BGE|1|a|C|944

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7BGE|1|a|C|941
7BGE|1|a|C|942
7BGE|1|a|G|943
7BGE|1|a|C|944
7BGE|1|a|A|945
7BGE|1|a|C|946
*
7BGE|1|a|G|1390
7BGE|1|a|U|1391
7BGE|1|a|U|1392
7BGE|1|a|C|1393
7BGE|1|a|C|1394
7BGE|1|a|C|1395
7BGE|1|a|G|1396
7BGE|1|a|G|1397
7BGE|1|a|G|1398

Current chains

Chain a

16S ribosomal RNA

Nearby chains

Chain g

30S ribosomal protein S7

Chain i

30S ribosomal protein S9