IL_7BHP_050

3D structure

PDB id

7BHP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the human Ebp1 - 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

CCGAAAG*CUAGUAGCUG

Length

17 nucleotides

Bulged bases

7BHP|1|L5|A|1650, 7BHP|1|L5|G|1654

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7BHP|1|L5|C|1520
7BHP|1|L5|C|1521
7BHP|1|L5|G|1522
7BHP|1|L5|A|1523
7BHP|1|L5|A|1524
7BHP|1|L5|A|1525
7BHP|1|L5|G|1526
*
7BHP|1|L5|C|1648
7BHP|1|L5|U|1649
7BHP|1|L5|A|1650
7BHP|1|L5|G|1651
7BHP|1|L5|U|1652
7BHP|1|L5|A|1653
7BHP|1|L5|G|1654
7BHP|1|L5|C|1655
7BHP|1|L5|U|1656
7BHP|1|L5|G|1657

Current chains

Chain L5

28S ribosomal RNA

Nearby chains

Chain LC

60S ribosomal protein L4

Chain LL

60S ribosomal protein L13

Chain LN

60S ribosomal protein L15

Chain La

60S ribosomal protein L27a

Chain Lj

60S ribosomal protein L37