IL_7BHP_059
3D structure
- PDB id
- 7BHP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the human Ebp1 - 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- CUCGCAGACCCGACCCGCCACG*CG
- Length
- 24 nucleotides
- Bulged bases
- 7BHP|1|L5|C|1707, 7BHP|1|L5|C|1714
- QA status
- Missing nucleotides
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7BHP_059 not in the Motif Atlas
- Homologous match to IL_8P9A_264
- Geometric discrepancy: 0.5376
- The information below is about IL_8P9A_264
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_25463.2
- Basepair signature
- cWW-L-cWW-L-L
- Number of instances in this motif group
- 3
Unit IDs
7BHP|1|L5|C|1694
7BHP|1|L5|U|1695
7BHP|1|L5|C|1696
7BHP|1|L5|G|1697
7BHP|1|L5|C|1698
7BHP|1|L5|A|1699
7BHP|1|L5|G|1700
7BHP|1|L5|A|1701
7BHP|1|L5|C|1702
7BHP|1|L5|C|1703
7BHP|1|L5|C|1704
7BHP|1|L5|G|1705
7BHP|1|L5|A|1706
7BHP|1|L5|C|1707
7BHP|1|L5|C|1714
7BHP|1|L5|C|1715
7BHP|1|L5|G|1716
7BHP|1|L5|C|1717
7BHP|1|L5|C|1718
7BHP|1|L5|A|1719
7BHP|1|L5|C|1720
7BHP|1|L5|G|1721
*
7BHP|1|L5|C|1841
7BHP|1|L5|G|1842
Current chains
- Chain L5
- 28S ribosomal RNA
Nearby chains
- Chain LC
- 60S ribosomal protein L4
- Chain LF
- 60S ribosomal protein L7
- Chain LQ
- 60S ribosomal protein L18
- Chain LT
- 60S ribosomal protein L21
- Chain Lb
- 60S ribosomal protein L29
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