IL_7BHP_079

3D structure

PDB id

7BHP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the human Ebp1 - 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

UAUAGACAGCAG*CUGCCGAA

Length

20 nucleotides

Bulged bases

7BHP|1|L5|A|1960

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7BHP|1|L5|U|1957
7BHP|1|L5|A|1958
7BHP|1|L5|U|1959
7BHP|1|L5|A|1960
7BHP|1|L5|G|1961
7BHP|1|L5|A|1962
7BHP|1|L5|C|1963
7BHP|1|L5|A|1964
7BHP|1|L5|G|1965
7BHP|1|L5|C|1966
7BHP|1|L5|A|1967
7BHP|1|L5|G|1968
*
7BHP|1|L5|C|2019
7BHP|1|L5|U|2020
7BHP|1|L5|G|2021
7BHP|1|L5|C|2022
7BHP|1|L5|C|2023
7BHP|1|L5|G|2024
7BHP|1|L5|A|2025
7BHP|1|L5|A|2026

Current chains

Chain L5

28S ribosomal RNA

Nearby chains

Chain Lm

Ubiquitin-60S ribosomal protein L40