IL_7BHP_156

3D structure

PDB id

7BHP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the human Ebp1 - 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

UCGUACG*UUGAAA

Length

13 nucleotides

Bulged bases

7BHP|1|L5|G|5041

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7BHP|1|L5|U|5003
7BHP|1|L5|C|5004
7BHP|1|L5|G|5005
7BHP|1|L5|U|5006
7BHP|1|L5|A|5007
7BHP|1|L5|C|5008
7BHP|1|L5|G|5009
*
7BHP|1|L5|U|5039
7BHP|1|L5|U|5040
7BHP|1|L5|G|5041
7BHP|1|L5|A|5042
7BHP|1|L5|A|5043
7BHP|1|L5|A|5044

Current chains

Chain L5

28S ribosomal RNA

Nearby chains

Chain LB

60S ribosomal protein L3

Chain LW

60S ribosomal protein L24

Chain Ld

60S ribosomal protein L31