IL_7BL2_088

3D structure

PDB id

7BL2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

pre-50S-ObgE particle state 1

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

GUUC*GGC

Length

7 nucleotides

Bulged bases

7BL2|1|A|U|2402

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7BL2_088 not in the Motif Atlas

Geometric match to IL_3SJ2_002

Geometric discrepancy: 0.2401

The information below is about IL_3SJ2_002

Detailed Annotation

Isolated cWH basepair

Broad Annotation

No text annotation

Motif group

IL_10892.2

Basepair signature

cWW-cHW-cWW

Number of instances in this motif group

58

Unit IDs

7BL2|1|A|G|2400
7BL2|1|A|U|2401
7BL2|1|A|U|2402
7BL2|1|A|C|2403
*
7BL2|1|A|G|2414
7BL2|1|A|G|2415
7BL2|1|A|C|2416

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain 1

50S ribosomal protein L33

Chain L

50S ribosomal protein L15