3D structure

PDB id
7BL3 (explore in PDB, NAKB, or RNA 3D Hub)
Description
pre-50S-ObgE particle state 2
Experimental method
ELECTRON MICROSCOPY
Resolution
3.5 Å

Loop

Sequence
AAUU*AU
Length
6 nucleotides
Bulged bases
7BL3|1|A|U|846
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7BL3_022 not in the Motif Atlas
Geometric match to IL_5J7L_267
Geometric discrepancy: 0.1547
The information below is about IL_5J7L_267
Detailed Annotation
90 degree turn
Broad Annotation
90 degree turn
Motif group
IL_90729.1
Basepair signature
cWW-L-cWW
Number of instances in this motif group
30

Unit IDs

7BL3|1|A|A|844
7BL3|1|A|A|845
7BL3|1|A|U|846
7BL3|1|A|U|847
*
7BL3|1|A|A|933
7BL3|1|A|U|934

Current chains

Chain A
23S ribosomal RNA

Nearby chains

Chain Z
50S ribosomal protein L30

Coloring options:


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