IL_7BL6_030

3D structure

PDB id

7BL6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S-ObgE-GMPPNP particle

Experimental method

ELECTRON MICROSCOPY

Resolution

4 Å

Loop

Sequence

GGG*UUAC

Length

7 nucleotides

Bulged bases

7BL6|1|A|A|896

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7BL6_030 not in the Motif Atlas

Geometric match to IL_1U6B_001

Geometric discrepancy: 0.33

The information below is about IL_1U6B_001

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

Isolated non-canonical cWW pair

Motif group

IL_57744.1

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

22

Unit IDs

7BL6|1|A|G|880
7BL6|1|A|G|881
7BL6|1|A|G|882
*
7BL6|1|A|U|894
7BL6|1|A|U|895
7BL6|1|A|A|896
7BL6|1|A|C|897

Current chains

Chain A

23S ribosomal RNA

Nearby chains