IL_7BL6_041

3D structure

PDB id

7BL6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S-ObgE-GMPPNP particle

Experimental method

ELECTRON MICROSCOPY

Resolution

4 Å

Loop

Sequence

GAAA*UC

Length

6 nucleotides

Bulged bases

7BL6|1|A|A|1088

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7BL6_041 not in the Motif Atlas

Geometric match to IL_4YAZ_008

Geometric discrepancy: 0.2423

The information below is about IL_4YAZ_008

Detailed Annotation

Multiple bulged bases

Broad Annotation

No text annotation

Motif group

IL_82107.5

Basepair signature

cWW-cWW

Number of instances in this motif group

31

Unit IDs

7BL6|1|A|G|1087
7BL6|1|A|A|1088
7BL6|1|A|A|1089
7BL6|1|A|A|1090
*
7BL6|1|A|U|1101
7BL6|1|A|C|1102

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain g

50S ribosomal protein L36