IL_7BL6_064

3D structure

PDB id

7BL6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S-ObgE-GMPPNP particle

Experimental method

ELECTRON MICROSCOPY

Resolution

4 Å

Loop

Sequence

CGUAAC*GGAGAAG

Length

13 nucleotides

Bulged bases

7BL6|1|A|G|1699

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7BL6_064 not in the Motif Atlas

Geometric match to IL_7RQB_068

Geometric discrepancy: 0.1124

The information below is about IL_7RQB_068

Detailed Annotation

tSH-tSH-tHH-tHS

Broad Annotation

No text annotation

Motif group

IL_65969.2

Basepair signature

cWW-tSH-tSH-tHH-tHS-cWW

Number of instances in this motif group

8

Unit IDs

7BL6|1|A|C|1686
7BL6|1|A|G|1687
7BL6|1|A|U|1688
7BL6|1|A|A|1689
7BL6|1|A|A|1690
7BL6|1|A|C|1691
*
7BL6|1|A|G|1696
7BL6|1|A|G|1697
7BL6|1|A|A|1698
7BL6|1|A|G|1699
7BL6|1|A|A|1700
7BL6|1|A|A|1701
7BL6|1|A|G|1702

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain C

50S ribosomal protein L2