IL_7BL6_088

3D structure

PDB id

7BL6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S-ObgE-GMPPNP particle

Experimental method

ELECTRON MICROSCOPY

Resolution

4 Å

Loop

Sequence

GUUC*GGC

Length

7 nucleotides

Bulged bases

7BL6|1|A|U|2402

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7BL6_088 not in the Motif Atlas

Geometric match to IL_7A0S_041

Geometric discrepancy: 0.2756

The information below is about IL_7A0S_041

Detailed Annotation

Isolated cWS basepair

Broad Annotation

No text annotation

Motif group

IL_42997.3

Basepair signature

cWW-L-R-cWW

Number of instances in this motif group

20

Unit IDs

7BL6|1|A|G|2400
7BL6|1|A|U|2401
7BL6|1|A|U|2402
7BL6|1|A|C|2403
*
7BL6|1|A|G|2414
7BL6|1|A|G|2415
7BL6|1|A|C|2416

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain 1

50S ribosomal protein L33

Chain 3

50S ribosomal protein L35

Chain L

50S ribosomal protein L15